Fernando Pérez

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Welcome

I am a research scientist at the Helen Wills Neuroscience Institute at U.C. Berkeley. My work involves the development and implementation of new algorithms and tools for neuroimaging, with a special interest in functional MRI. I am also actively involved with the development of new tools for high-level scientific computing, mostly using the Python language. In this site, you can find more research details, including publications, as well as a subset of talks presented at various venues.

I am convinced that we need better tools for scientific computing and that the efforts of many to build them based on the Python language are starting to pay off in a way that will have significant benefits in the long run. I try to do my part on that front by working on IPython, the development of neuroimaging tools such as nipy (and especially its nitime component), and my contributions to various projects affiliated with the scipy stack. The Py4Science page contains details and material on this topic.

On campus, I coordinate an informal seminar every 2 weeks that is open to all, where we cover topics related to the use and development of Python for scientific research. If you are interested in using Python in your research, would like to learn more about it or have developed something you’d like feedback on, please stop by!

News

March 2011
I’ve finally gathered the slides for our minisymposium on Python for Scientific computing at the SIAM CSE 2011 conference (blog post and pictures).
March 2011
The Sage Days 29 workshop was a success on multiple fronts, and in particular for IPython we made a ton of progress.
February 2011
During the I spoke during the 2011 AAAS annual meeting at a symposium titled The Digitization of Science: Reproducibility and Interdisciplinary Knowledge Transfer organized by Columbia’s Victoria Stodden. I have put up a short `blog post`_ about the event as well as my slides and an extended abstract.
February 2011
I’m thrilled to have been invited to present the keynote at this year’s EuroScipy conference. I haven’t had a chance yet to attend the European version of the SciPy conferences, so I’m very much looking forward to it.
December 2010
My recent trip to Scipy India 2010 was a very interesting experience; I’m really impressed by the Indian government’s vision with their FOSSEE.in project. Here are the slides for my invited talk and some general pictures_, but I have yet to write a proper post summarizing things. Stay tuned.

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Contact

Fernando Perez

Email
fernando.perez@berkeley.edu
Office
10 Giannini Hall
Henry H. Wheeler Jr. Brain Imaging Center.
+1 510.643.4010 (voice)
+1 510.643.4952 (fax)
Map
Enter the West facing building door, then ring the first door on the left.
Post
10 Giannini Hall, MC 3190
Henry H. Wheeler, Jr. Brain Imaging Center
University of California, Berkeley
Berkeley, CA 94720-3190